Michael Hanke

Instruments

• DataLad Concepts
• DataLad Handbook
• datalad-core
• datalad-next
• datasalad
• FAIRly big processing workflow
• git-annex wheel
• git-lad
• REMODNAV

Projects

• Accessing Behavior for Clinical Data and Joint Usage
• Data Management for Computational Modelling
• Data management for reproducible data-driven computational modeling cross-species and cross-labs
• DataLad
• DataLad v2
• Distribits
• Distribits 2024
• Distribits 2025
• Eye-movement during naturalistic stimulation
• Key Mechanisms of Motor Control in Health and Disease
• Organized Research Information: Ontology-mapping, Curation, Orchestration
• Study Forrest
• The DataLad Handbook Project

Publications

• Wie die Bilder laufen lernten: Kognitive Prozesse bei der Bewegungswahrnehmung (2004)
• Retinotopic activation in response to subjective contours in primary visual cortex (2008)
• PyMVPA: A Python toolbox for multivariate pattern analysis of fMRI data (2009-01-28)
• Advancing the understanding of brain function with multivariate pattern analysis (2009-06-25)
• PyMVPA: a unifying approach to the analysis of neuroscientific data (2009)
• Advancing Neuroimaging Research with Predictive Multivariate Pattern Analysis (MVPA) (2010-01-01)
• Debian Med: Integrated software environment for all medical purposes based on Debian GNU/Linux (2010-01-01)
• Statistical learning analysis in neuroscience: aiming for transparency (2010)
• Investigation of melodic contour processing in the brain using multivariate pattern-based fMRI (2011-07)
• A common, high-dimensional model of the representational space in human ventral temporal cortex (2011-10)
• Neuroscience runs on GNU/Linux (2011)
• Representation of Biological Classes in the Human Brain (2012-02-22)
• Data sharing in neuroimaging research (2012)
• Open is not enough. Let’s take the next step: An integrated, community-driven computing platform for neuroscience (2012)
• Evidence for feature binding in the superior parietal lobule (2013-03)
• Pattern classification precedes region-average hemodynamic response in early visual cortex (2013-09)
• Transmodal Analysis of Neural Signals (2013)
• A high-resolution 7-Tesla fMRI dataset from complex natural stimulation with an audio movie (2014-05-27)
• High-resolution 7-Tesla fMRI data on the perception of musical genres – an extension to the studyforrest dataset (2014-05-27)
• The right temporo-parietal junction contributes to visual feature binding (2014-11)
• A communication hub for a decentralized collaboration on studying real-life cognition (2015-03-10)
• Portrayed emotions in the movie "Forrest Gump" (2015-04-13)
• Four aspects to make science open "by design" and not as an after-thought (2015-07-18)
• The Brain Imaging Data Structure: a protocol for standardizing and describing outputs of neuroimaging experiments (2015-12-16)
• Brains on beats (2016-01-01)
• A Model of Representational Spaces in Human Cortex (2016-03-14)
• An annotation of cuts, depicted locations, and temporal progression in the motion picture "Forrest Gump" (2016-09-08)
• A studyforrest extension, retinotopic mapping and localization of higher visual areas (2016-10-25)
• A studyforrest extension, simultaneous fMRI and eye gaze recordings during prolonged natural stimulation (2016-10-25)
• Best Practices in Data Analysis and Sharing in Neuroimaging using MRI (2017-02-23)
• Standards for Best Practices in Data Analysis and Sharing in Neuroimaging using MRI (2017-02-23)
• The effect of acquisition resolution on orientation decoding from V1 BOLD fMRI at 7 Tesla (2017-03)
• Towards standard practices for sharing computer code and programs in neuroscience (2017-06)
• Task relevance modulates the representation of features and feature dimensions in the target template (2017-07-03)
• Ultra high-field multi-resolution fMRI data for orientation decoding in visual cortex (2017-08)
• Distractor-resistant short-term memory is supported by transient changes in neural stimulus representations (2017-09-01)
• Encoding of auditory temporal Gestalt in the human brain. (2018-01-20)
• Spatial band-pass filtering aids decoding musical genres from auditory cortex 7T fMRI. (2018-02-02)
• The effect of acquisition resolution on orientation decoding from V1: comparison of 3T and 7T (2018-04-22)
• No evidence for enhanced distractor template representation in early visual cortex (2018-11)
• Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging (2019-02-07)
• Neural signatures underlying deliberation in human foraging decisions (2019-06-17)
• A Python-based Algorithm for Robust Event Detection for Eye Movements During Natural Viewing (2019-07-18)
• PyBIDS: Python tools for BIDS datasets (2019-08-12)
• multimatch_gaze: The MultiMatch algorithm for gaze comparison in Python (2019-08-16)
• A practical guide to functional magnetic resonance imaging with simultaneous eye tracking for cognitive neuroimaging research (2019-10-02)
• Individual face and house-related eye movement patterns distinctively activate FFA and PPA in the absence of faces and houses. (2019-12-04)
• Macroscopic information-based taste representations in insular cortex are shaped by stimulus concentration (2020-03-16)
• The role of auxiliary parameters in evaluating voxel-wise encoding models for 3T and 7T BOLD fMRI data (2020-04-08)
• REMoDNaV: Robust Eye-Movement Classification for Dynamic Stimulation (2020-07-24)
• Nature abhors a paywall: How open science can realize the potential of naturalistic stimuli (2020-08)
• In defense of decentralized research data management (2021-01-11)
• NFDI-Neuro: Building a community for neuroscience research data management in Germany (2021-01-12)
• A studyforrest extension, an annotation of spoken language in the German dubbed movie “Forrest Gump” and its audio-description (2021-01-28)
• DataLad: distributed system for joint management of code, data, and their relationship (2021-07-01)
• FAIRly big: A framework for computationally reproducible processing of large-scale data (2022-03-11)
• Processing of visual and non-visual naturalistic spatial information in the "parahippocampal place area" (2022-04-01)
• Research Data Management with DataLad - Workshop for the Max Planck School of Cognition (2022-07-20)
• Cross-cohort replicability and generalizability of connectivity-based psychometric prediction patterns (2022-11)
• The DataLad Handbook (2023-02-14)
• Research Data Management and Data Sharing for Reproducible Research—Results of a Community Survey of the German National Research Data Infrastructure Initiative Neuroscience (2023-02)
• How to establish and maintain a multimodal animal research dataset using DataLad (2023-06-05)
• Datalad — An Introduction to Research Data Management (2023-12-01)
• A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps (2024-01)
• Proceedings of the OHBM Brainhack 2022 (2024-03-18)
• Teaching research data management with DataLad: a multi-year, multi-domain effort (2024-05-07)
• HeuDiConv — flexible DICOM conversion into structured directory layouts (2024-07-03)
• DataLad: Our Introduction, Your Usecases (2025-06-30)
• Data Management with DataLad (2025-09-29)
• DataLad: An Introduction (2025-10-27)
• Documentation of the TRR379
• Lies, irony, and contradiction — an annotation of semantic conflict in the movie "Forrest Gump"